病变分割是放射线工作流程的关键步骤。手动分割需要长时间的执行时间，并且容易发生可变性，从而损害了放射线研究及其鲁棒性的实现。在这项研究中，对非小细胞肺癌患者的计算机断层扫描图像进行了深入学习的自动分割方法。还评估了手动与自动分割在生存放射模型的性能中的使用。方法总共包括899名NSCLC患者（2个专有：A和B，1个公共数据集：C）。肺部病变的自动分割是通过训练先前开发的建筑NNU-NET进行的，包括2D，3D和级联方法。用骰子系数评估自动分割的质量，以手动轮廓为参考。通过从数据集A的手动和自动轮廓中提取放射性的手工制作和深度学习特征来探索自动分割对患者生存的放射素模型对患者生存的性能的影响。评估并比较模型的精度。结果通过平均2D和3D模型的预测以及应用后处理技术来提取最大连接的组件，可以实现具有骰子= 0.78 +（0.12）的自动和手动轮廓之间的最佳一致性。当使用手动或自动轮廓，手工制作或深度特征时，在生存模型的表现中未观察到统计差异。最好的分类器显示出0.65至0.78之间的精度。结论NNU-NET在自动分割肺部病变中的有希望的作用已得到证实，从而大大降低了时必的医生的工作量，而不会损害基于放射线学的生存预测模型的准确性。

Retrieval-augmented in-context learning has emerged as a powerful approach for addressing knowledge-intensive tasks using frozen language models (LM) and retrieval models (RM). Existing work has combined these in simple "retrieve-then-read" pipelines in which the RM retrieves passages that are inserted into the LM prompt. To begin to fully realize the potential of frozen LMs and RMs, we propose Demonstrate-Search-Predict (DSP), a framework that relies on passing natural language texts in sophisticated pipelines between an LM and an RM. DSP can express high-level programs that bootstrap pipeline-aware demonstrations, search for relevant passages, and generate grounded predictions, systematically breaking down problems into small transformations that the LM and RM can handle more reliably. We have written novel DSP programs for answering questions in open-domain, multi-hop, and conversational settings, establishing in early evaluations new state-of-the-art in-context learning results and delivering 37-200%, 8-40%, and 80-290% relative gains against vanilla LMs, a standard retrieve-then-read pipeline, and a contemporaneous self-ask pipeline, respectively.

Semi-supervised learning (SSL) has made significant strides in the field of remote sensing. Finding a large number of labeled datasets for SSL methods is uncommon, and manually labeling datasets is expensive and time-consuming. Furthermore, accurately identifying remote sensing satellite images is more complicated than it is for conventional images. Class-imbalanced datasets are another prevalent phenomenon, and models trained on these become biased towards the majority classes. This becomes a critical issue with an SSL model's subpar performance. We aim to address the issue of labeling unlabeled data and also solve the model bias problem due to imbalanced datasets while achieving better accuracy. To accomplish this, we create "artificial" labels and train a model to have reasonable accuracy. We iteratively redistribute the classes through resampling using a distribution alignment technique. We use a variety of class imbalanced satellite image datasets: EuroSAT, UCM, and WHU-RS19. On UCM balanced dataset, our method outperforms previous methods MSMatch and FixMatch by 1.21% and 0.6%, respectively. For imbalanced EuroSAT, our method outperforms MSMatch and FixMatch by 1.08% and 1%, respectively. Our approach significantly lessens the requirement for labeled data, consistently outperforms alternative approaches, and resolves the issue of model bias caused by class imbalance in datasets.

Many real-world applications of language models (LMs), such as code autocomplete and writing assistance, involve human-LM interaction, but the main LM benchmarks are non-interactive, where a system produces output without human intervention. To evaluate human-LM interaction, we develop a framework, Human-AI Language-based Interaction Evaluation (H-LINE), that expands non-interactive evaluation along three dimensions, capturing (i) the interactive process, not only the final output; (ii) the first-person subjective experience, not just a third-party assessment; and (iii) notions of preference beyond quality. We then design five tasks ranging from goal-oriented to open-ended to capture different forms of interaction. On four state-of-the-art LMs (three variants of OpenAI's GPT-3 and AI21's J1-Jumbo), we find that non-interactive performance does not always result in better human-LM interaction and that first-person and third-party metrics can diverge, suggesting the importance of examining the nuances of human-LM interaction.

To simulate bosons on a qubit- or qudit-based quantum computer, one has to regularize the theory by truncating infinite-dimensional local Hilbert spaces to finite dimensions. In the search for practical quantum applications, it is important to know how big the truncation errors can be. In general, it is not easy to estimate errors unless we have a good quantum computer. In this paper we show that traditional sampling methods on classical devices, specifically Markov Chain Monte Carlo, can address this issue with a reasonable amount of computational resources available today. As a demonstration, we apply this idea to the scalar field theory on a two-dimensional lattice, with a size that goes beyond what is achievable using exact diagonalization methods. This method can be used to estimate the resources needed for realistic quantum simulations of bosonic theories, and also, to check the validity of the results of the corresponding quantum simulations.

Identifying the production dates of historical manuscripts is one of the main goals for paleographers when studying ancient documents. Automatized methods can provide paleographers with objective tools to estimate dates more accurately. Previously, statistical features have been used to date digitized historical manuscripts based on the hypothesis that handwriting styles change over periods. However, the sparse availability of such documents poses a challenge in obtaining robust systems. Hence, the research of this article explores the influence of data augmentation on the dating of historical manuscripts. Linear Support Vector Machines were trained with k-fold cross-validation on textural and grapheme-based features extracted from historical manuscripts of different collections, including the Medieval Paleographical Scale, early Aramaic manuscripts, and the Dead Sea Scrolls. Results show that training models with augmented data improve the performance of historical manuscripts dating by 1% - 3% in cumulative scores. Additionally, this indicates further enhancement possibilities by considering models specific to the features and the documents' scripts.

Vehicle trajectory data has received increasing research attention over the past decades. With the technological sensing improvements such as high-resolution video cameras, in-vehicle radars and lidars, abundant individual and contextual traffic data is now available. However, though the data quantity is massive, it is by itself of limited utility for traffic research because of noise and systematic sensing errors, thus necessitates proper processing to ensure data quality. We draw particular attention to extracting high-resolution vehicle trajectory data from video cameras as traffic monitoring cameras are becoming increasingly ubiquitous. We explore methods for automatic trajectory data reconciliation, given "raw" vehicle detection and tracking information from automatic video processing algorithms. We propose a pipeline including a) an online data association algorithm to match fragments that are associated to the same object (vehicle), which is formulated as a min-cost network flow problem of a graph, and b) a trajectory reconciliation method formulated as a quadratic program to enhance raw detection data. The pipeline leverages vehicle dynamics and physical constraints to associate tracked objects when they become fragmented, remove measurement noise on trajectories and impute missing data due to fragmentations. The accuracy is benchmarked on a sample of manually-labeled data, which shows that the reconciled trajectories improve the accuracy on all the tested input data for a wide range of measures. An online version of the reconciliation pipeline is implemented and will be applied in a continuous video processing system running on a camera network covering a 4-mile stretch of Interstate-24 near Nashville, Tennessee.

We introduce a linguistically enhanced combination of pre-training methods for transformers. The pre-training objectives include POS-tagging, synset prediction based on semantic knowledge graphs, and parent prediction based on dependency parse trees. Our approach achieves competitive results on the Natural Language Inference task, compared to the state of the art. Specifically for smaller models, the method results in a significant performance boost, emphasizing the fact that intelligent pre-training can make up for fewer parameters and help building more efficient models. Combining POS-tagging and synset prediction yields the overall best results.

Modern statistical learning algorithms are capable of amazing flexibility, but struggle with interpretability. One possible solution is sparsity: making inference such that many of the parameters are estimated as being identically 0, which may be imposed through the use of nonsmooth penalties such as the $\ell_1$ penalty. However, the $\ell_1$ penalty introduces significant bias when high sparsity is desired. In this article, we retain the $\ell_1$ penalty, but define learnable penalty weights $\lambda_p$ endowed with hyperpriors. We start the article by investigating the optimization problem this poses, developing a proximal operator associated with the $\ell_1$ norm. We then study the theoretical properties of this variable-coefficient $\ell_1$ penalty in the context of penalized likelihood. Next, we investigate application of this penalty to Variational Bayes, developing a model we call the Sparse Bayesian Lasso which allows for behavior qualitatively like Lasso regression to be applied to arbitrary variational models. In simulation studies, this gives us the Uncertainty Quantification and low bias properties of simulation-based approaches with an order of magnitude less computation. Finally, we apply our methodology to a Bayesian lagged spatiotemporal regression model of internal displacement that occurred during the Iraqi Civil War of 2013-2017.

Single-cell reference atlases are large-scale, cell-level maps that capture cellular heterogeneity within an organ using single cell genomics. Given their size and cellular diversity, these atlases serve as high-quality training data for the transfer of cell type labels to new datasets. Such label transfer, however, must be robust to domain shifts in gene expression due to measurement technique, lab specifics and more general batch effects. This requires methods that provide uncertainty estimates on the cell type predictions to ensure correct interpretation. Here, for the first time, we introduce uncertainty quantification methods for cell type classification on single-cell reference atlases. We benchmark four model classes and show that currently used models lack calibration, robustness, and actionable uncertainty scores. Furthermore, we demonstrate how models that quantify uncertainty are better suited to detect unseen cell types in the setting of atlas-level cell type transfer.